Burda, Jaroslav: search on Z-Library

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1

Dogs are sensitive to small variations of the Earth’s magnetic field

Hart, Vlastimil, Nováková, Petra, Malkemper, Erich, Begall, Sabine, Hanzal, Vladimír, Ježek, Miloš, Kušta, Tomáš, Němcová, Veronika, Adámková, Jana, Benediktová, Kateřina, Červený, Jaroslav, Burda, Hy

Journal:

Frontiers in Zoology

Year:

2013

Language:

english

File:

PDF, 715 KB

english, 2013

2

Hydrogen embrittlement and fracture mode of EUROFER 97 ferritic-martensitic steel

Karel Splichal, Jan Berka, Jaroslav Burda, Michal Falcník

Journal:

International Journal of Pressure Vessels and Piping

Year:

2012

Language:

english

File:

PDF, 1.85 MB

english, 2012

3

Magnetic alignment in mammals and other animals

Sabine Begall, E. Pascal Malkemper, Jaroslav Červený, Pavel Němec, Hynek Burda

Journal:

Mammalian Biology - Zeitschrift für Säugetierkunde

Year:

2013

Language:

english

File:

PDF, 980 KB

english, 2013

4

Doubt on a dogma: aquation of equatorial ligands of Pt(IV) complexes under physiological conditions

Kastner, Alexander, Poetsch, Isabella, Mayr, Josef, Burda, Jaroslav V., Roller, Alexander, Heffeter, Petra, Keppler, Bernhard K., Kowol, Christian R.

Journal:

Angewandte Chemie

Year:

2019

Language:

english

File:

PDF, 1.19 MB

english, 2019

5

Pt-bridges in various single-strand and double-helix DNA sequences. DFT and MP2 study of the cisplatin coordination with guanine, adenine, and cytosine

Matěj Pavelka, Jaroslav V. Burda

Journal:

Journal of Molecular Modeling

Year:

2007

Language:

english

File:

PDF, 479 KB

english, 2007

6

Exploration of selected electronic characteristics of half-sandwich organoruthenium(II) β-diketonate complexes

Sochorová Vokáčová, Zuzana, Turel, Iztok, Burda, Jaroslav V.

Journal:

Journal of Molecular Modeling

Year:

2018

Language:

english

File:

PDF, 1.66 MB

english, 2018

7

Protein environment affects the water-tryptophan binding mode. MD, QM/MM, and NMR studies of Engrailed homeodomain mutants

Spackova, Nada, Trosanova, Zuzana, Sebesta, Filip, Jansen, Severine, Burda, Jaroslav, Srb, Pavel, Zachrdla, Milan, Zidek, Lukas, Kozelka, Jiri

Journal:

Physical Chemistry Chemical Physics

Year:

2018

Language:

english

File:

PDF, 3.45 MB

english, 2018

8

NMR spectroscopic detection of chirality and enantiopurity in referenced systems without formation of diastereomers

Labuta, Jan, Ishihara, Shinsuke, Šikorský, Tomáš, Futera, Zdeněk, Shundo, Atsuomi, Hanyková, Lenka, Burda, Jaroslav V., Ariga, Katsuhiko, Hill, Jonathan P.

Journal:

Nature Communications

Year:

2013

Language:

english

File:

PDF, 1.11 MB

english, 2013

9

Activation barriers and rate constants for hydration of platinum and palladium square-planar complexes: An ab initio study

Burda, Jaroslav V., Zeizinger, Michal, Leszczynski, Jerzy

Journal:

The Journal of Chemical Physics

Year:

2004

Language:

english

File:

PDF, 449 KB

english, 2004

10

QM and QM/MM umbrella sampling MD study of the formation of Hg(II)-thymine bond: Model for evaluation of the reaction energy profiles in solutions with constant pH

Å ebesta, Filip, Å ebera, Jakub, SychrovskÃ½, VladimÃr, Tanaka, Yoshiyuki, Burda, Jaroslav V.

Journal:

Journal of Computational Chemistry

Year:

2020

Language:

english

File:

PDF, 2.25 MB

english, 2020

11

Hydration process as an activation of trans- and cisplatin complexes in anticancer treatment. DFT and ab initio computational study of thermodynamic and kinetic parameters

Jaroslav V. Burda, Michal Zeizinger, Jerzy Leszczynski

Journal:

Journal of Computational Chemistry

Year:

2005

Language:

english

File:

PDF, 212 KB

english, 2005

12

Stabilization of the Purine•Purine•Pyrimidine DNA Base Triplets by Divalent Metal Cations

Šponer, Jiři, Sabat, Michal, Burda, Jaroslav V., Doody, Anne M., Leszczynski, Jerzy, Hobza, Pavel

Journal:

Journal of Biomolecular Structure and Dynamics

Year:

1998

Language:

english

File:

PDF, 319 KB

english, 1998

13

A quantum chemical ab initio study of the interaction between Co+ and Ni+ ions with CO2 and N2O

Jaroslav V Burda

Journal:

Chemical Physics

Year:

1998

Language:

english

File:

PDF, 167 KB

english, 1998

14

Cisplatin Interaction with Cysteine and Methionine in Aqueous Solution: Computational DFT/PCM Study

Zimmermann, Tomáš, Chval, Zdeněk, Burda, Jaroslav V.

Journal:

Journal of Physical Chemistry B

Year:

2009

Language:

english

File:

PDF, 445 KB

english, 2009

15

Exploration of various electronic properties along the reaction coordinate for hydration of Pt(II) and Ru(II) complexes; the CCSD, MPx, and DFT computational study

Burda, Jaroslav V., Futera, Zdeněk, Chval, Zdeněk

Journal:

Journal of Molecular Modeling

Year:

2013

Language:

english

File:

PDF, 1006 KB

english, 2013

16

Raman spectroscopy study of acid–base and structural properties of 9-[2-(phosphonomethoxy)ethyl]adenine in aqueous solutions

Vladimír Kopecký Jr., Peter Mojzeš, Jaroslav V. Burda, Lubomír Dostál

Journal:

Year:

2002

Language:

english

File:

PDF, 123 KB

english, 2002

17

Ab Initio Study of the Interaction of Guanine and Adenine with Various Mono- and Bivalent Metal Cations (Li + , Na + , K + , Rb + , Cs + ; Cu + , Ag + , Au + ; Mg 2+ , Ca 2+ , Sr 2+ , Ba 2+ ; Zn 2+ , Cd 2+

Burda, Jaroslav V., Šponer, Jiří, Hobza, Pavel

Journal:

Journal of Physical Chemistry

Year:

1996

Language:

english

File:

PDF, 299 KB

english, 1996

18

Chronic pancreatitis and the composition of plasma phosphatidylcholine fatty acids

Zeman, Miroslav, Macášek, Jaroslav, Burda, Michal, Tvrzická, Eva, Vecka, Marek, Krechler, Tomáš, Staňková, Barbora, Hrabák, Petr, Žák, Aleš

Journal:

Prostaglandins, Leukotrienes and Essential Fatty Acids (PLEFA)

Year:

2016

Language:

english

File:

PDF, 319 KB

english, 2016

19

Preface

Burda, Jaroslav, Leszczynski, Jerzy, Sokalski, W.

Journal:

International Journal of Molecular Sciences

Year:

2004

Language:

english

File:

PDF, 78 KB

english, 2004

20

Structure and stability of kaolinite/TiO2nanocomposite: DFT and MM computations

Jonáš Tokarský, Pavla Čapková, Jaroslav V. Burda

Journal:

Journal of Molecular Modeling

Year:

2012

Language:

english

File:

PDF, 870 KB

english, 2012

21

Exploring the potential energy surface for interaction of a trichloro(diethylenetriamine)gold(III) complex with strong nucleophiles

Dos Santos, Hélio F., Paschoal, Diego, Burda, Jaroslav V.

Journal:

Chemical Physics Letters

Year:

2012

Language:

english

File:

PDF, 574 KB

english, 2012

22

Estimation of transition-metal empirical parameters for molecular mechanical force fields

Šebesta, Filip, Sláma, Vladislav, Melcr, Josef, Futera, Zdenek, Burda, Jaroslav V.

Journal:

Journal of Chemical Theory and Computation

Year:

2016

Language:

english

File:

PDF, 2.41 MB

english, 2016

23

Energy transfer in aggregates of bacteriochlorophyll c self-assembled with azulene derivatives

Matěnová, Martina, Lorelei Horhoiu, Viviana, Dang, Florian-Xuan, Pospíšil, Petr, Alster, Jan, Burda, Jaroslav V., Silviu Balaban, Teodor, Pšenčík, Jakub

Journal:

Physical Chemistry Chemical Physics

Year:

2014

Language:

english

File:

PDF, 2.19 MB

english, 2014

24

Compass-controlled escape behavior in roe deer

Obleser, Petr, Hart, Vlastimil, Malkemper, E. Pascal, Begall, Sabine, Holá, Michaela, Painter, Michael S., Červený, Jaroslav, Burda, Hynek

Journal:

Behavioral Ecology and Sociobiology

Year:

2016

Language:

english

File:

PDF, 1.52 MB

english, 2016

25

Fatty Acid Composition of Plasma Phosphatidylcholine Determines Body Fat Parameters in Subjects with Metabolic Syndrome-Related Traits

Zeman, Miroslav, Vecka, Marek, Burda, Michal, Tvrzická, Eva, Staňková, Barbora, Macášek, Jaroslav, Žák, Aleš

Journal:

Metabolic Syndrome and Related Disorders

Year:

2017

Language:

english

File:

PDF, 191 KB

english, 2017

26

Correction to: Exploration of selected electronic characteristics of half-sandwich organoruthenium(II) β-diketonate complexes

Vokáčová, Zuzana Sochorová, Turel, Iztok, Burda, Jaroslav V.

Journal:

Journal of Molecular Modeling

Year:

2018

Language:

english

File:

PDF, 892 KB

english, 2018

27

The Influence of N 7 Guanine Modifications on the Strength of Watson−Crick Base Pairing and Guanine N 1 Acidity: Comparison of Gas-Phase and Condensed-Phase Trends

Burda, Jaroslav V., Šponer, Jiří, Hrabáková, Jana, Zeizinger, Michal, Leszczynski, Jerzy

Journal:

Journal of Physical Chemistry B

Year:

2003

Language:

english

File:

PDF, 99 KB

english, 2003

28

Theoretical model of copper Cu(I)/Cu(II) hydration. DFT and ab initio quantum chemical study

Jaroslav V. Burda, Matěj Pavelka, Milan Šimánek

Journal:

Journal of Molecular Structure: THEOCHEM

Year:

2004

Language:

english

File:

PDF, 294 KB

english, 2004

29

Finite element mesh adjusted to singularities applied to 2D flow

Pavel Burda, Jaroslav Novotný

Journal:

Year:

2003

Language:

english

File:

PDF, 178 KB

english, 2003

30

Modelling of Aniline-Vermiculite and Tetramethylammonium-Vermiculite; Test of Force Fields

Pavla Capková, Jaroslav V. Burda, Zdenek Weiss, Henk Schenk

Journal:

Journal of Molecular Modeling

Year:

1999

Language:

english

File:

PDF, 570 KB

english, 1999

31

Reactions of cisplatin and glycine in solution with constant pH: a computational study

Michera, Luděk, Nekadová, Michaela, Burda, Jaroslav V.

Journal:

Physical Chemistry Chemical Physics

Year:

2012

Language:

english

File:

PDF, 1.87 MB

english, 2012

32

A Systematic ab Initio Study of the Hydration of Selected Palladium Square-Planar Complexes. A Comparison with Platinum Analogues

Zeizinger, Michal, Burda, Jaroslav V., Šponer, Jiří, Kapsa, Vojtěch, Leszczynski, Jerzy

Journal:

Journal of Physical Chemistry A

Year:

2001

Language:

english

File:

PDF, 100 KB

english, 2001

33

Microstructural analysis of 800H steel exposed at test operation in HTHL by using FIB-SEM and HRTEM techniques

Marušáková, Daniela, Bublíková, Petra, Berka, Jan, Vávrovcová, Zuzana, Burda, Jaroslav

Journal:

Applied Surface Science

Year:

2017

Language:

english

File:

PDF, 7.30 MB

english, 2017

34

The influence of the metal cations and microhydration on the reaction trajectory of the N3 ↔ O2 thymine proton transfer: Quantum mechanical study

Šebesta, Filip, Brela, Mateusz Z., Diaz, Silvia, Miranda, Sebastian, Murray, Jane S., Gutiérrez-Oliva, Soledad, Toro-Labbé, Alejandro, Michalak, Artur, Burda, Jaroslav V.

Journal:

Journal of Computational Chemistry

Year:

2017

Language:

english

File:

PDF, 1.16 MB

english, 2017

35

Estimation of Electron Spectra Transitions of Free-Based Porphin and Mg-Porphin Using Various Quantum Chemical Approaches

Šeda, Josef, Burda, Jaroslav, Brázdová, Veronika, Kapsa, Vojtěch

Journal:

International Journal of Molecular Sciences

Year:

2004

Language:

english

File:

PDF, 751 KB

english, 2004

36

How Strong Can the Bend Be on a DNA Helix from Cisplatin? DFT and MP2 Quantum Chemical Calculations of Cisplatin-Bridged DNA Purine Bases

Burda, Jaroslav V., Leszczynski, Jerzy

Journal:

Inorganic Chemistry

Year:

2003

Language:

english

File:

PDF, 194 KB

english, 2003

37

The influence of a sugar-phosphate backbone on the cisplatin-bridged BpB? models of DNA purine bases. Quantum chemical calculations of Pt(ii) bonding characteristics

Zeizinger, Michal, Burda, Jaroslav V., Leszczynski, Jerzy

Journal:

Physical Chemistry Chemical Physics

Year:

2004

Language:

english

File:

PDF, 321 KB

english, 2004

38

Reaction mechanism of Ru(II) piano-stool complexes: Umbrella sampling QM/MM MD study

Futera, Zdeněk, Burda, Jaroslav V.

Journal:

Journal of Computational Chemistry

Year:

2014

Language:

english

File:

PDF, 1.01 MB

english, 2014

39

A posteriori error estimates applied to flow in a channel with corners

Pavel Burda, Jaroslav Novotný, Bedřich Sousedík

Journal:

Mathematics and Computers in Simulation

Year:

2003

Language:

english

File:

PDF, 189 KB

english, 2003

40

Metal ions in non-complementary DNA base pairs: an ab initio study of Cu(I), Ag(I), and Au(I) complexes with the cytosine-adenine base pair

Jiří Šponer, Michal Sabat, Jaroslav V. Burda, Jerzy Leszczynski, Pavel Hobza, Bernhard Lippert

Journal:

JBIC Journal of Biological Inorganic Chemistry

Year:

1999

Language:

english

File:

PDF, 107 KB

english, 1999

41

Mechanism of the cis -[Pt(1 R ,2 R -DACH)(H 2 O) 2 ] 2+ Intrastrand Binding to the Double-Stranded (pGpG)·(CpC) Dinucleotide in Aqueous Solution: A Computational DFT Study

Chval, Zdeněk, Kabeláč, Martin, Burda, Jaroslav V.

Journal:

Inorganic Chemistry

Year:

2013

Language:

english

File:

PDF, 2.64 MB

english, 2013

42

Analysis of the Reaction Force for a Gas Phase S N 2 Process: CH 3 Cl + H 2 O → CH 3 OH + HCl †

Politzer, Peter, Burda, Jaroslav V., Concha, Monica C., Lane, Pat, Murray, Jane S.

Journal:

Journal of Physical Chemistry A

Year:

2006

Language:

english

File:

PDF, 166 KB

english, 2006

43

The influence of arene-ring size on stacking interaction with canonical base pairs

Formánek, Martin, Burda, Jaroslav V.

Journal:

Chemical Physics Letters

Year:

2014

Language:

english

File:

PDF, 1.10 MB

english, 2014

44

Charge-scaled cavities in polarizable continuum model: Determination of acid dissociation constants for platinum-amino acid complexes

Zimmermann, Tomáš, Burda, Jaroslav V.

Journal:

The Journal of Chemical Physics

Year:

2009

Language:

english

File:

PDF, 1.78 MB

english, 2009

45

Directional orientation of pheasant chicks at the drinking dish and its potential for research on avian magnetoreception

Čapek, František, Průcha, Jaroslav, Socha, Vladimír, Hart, Vlastimil, Burda, Hynek

Journal:

Folia Zoologica

Year:

2017

Language:

english

File:

PDF, 1.47 MB

english, 2017

46

Comparison of the electronic properties, and thermodynamic and kinetic parameters of the aquation of selected platinum(II) derivatives with their anticancer IC50indexes

Ondřej Bradáč, Tomáš Zimmermann, Jaroslav V. Burda

Journal:

Journal of Molecular Modeling

Year:

2008

Language:

english

File:

PDF, 408 KB

english, 2008

47

Interaction of DNA Base Pairs with Various Metal Cations (Mg 2+ , Ca 2+ , Sr 2+ , Ba 2+ , Cu + , Ag + , Au + , Zn 2+ , Cd 2+ , and Hg 2+ ): Nonempirical ab Initio Calculations on Structures, Energies, and Nonadditivity of the Interaction

Burda, Jaroslav V., Šponer, Jiří, Leszczynski, Jerzy, Hobza, Pavel

Journal:

Journal of Physical Chemistry B

Year:

1997

Language:

english

File:

PDF, 158 KB

english, 1997

48

Magnetic alignment in warthogs Phacochoerus africanus and wild boars Sus scrofa

Červený, Jaroslav, Burda, Hynek, Ježek, Miloš, Kušta, Tomáš, Husinec, Václav, Nováková, Petra, Hart, Vlastimil, Hartová, Veronika, Begall, Sabine, Malkemper, E. Pascal

Journal:

Year:

2016

Language:

english

File:

PDF, 212 KB

english, 2016

49

Cisplatin interaction with cysteine and methionine, a theoretical DFT study

Tomáš Zimmermann, Michal Zeizinger, Jaroslav V. Burda

Journal:

Journal of Inorganic Biochemistry

Year:

2005

Language:

english

File:

PDF, 518 KB

english, 2005

50

Theoretical model of the aqua-copper [Cu(H2O)5]+cation interactions with guanine

Jaroslav V. Burda, Manoj K. Shukla, Jerzy Leszczynski

Journal:

Journal of Molecular Modeling

Year:

2005

Language:

english

File:

PDF, 440 KB

english, 2005

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